Index

C

capri_eval() (in module haddock.capri_eval) CapriEval (class in haddock.capri_eval) clust_fcc() (in module haddock.clust_fcc)

ClustFCC (class in haddock.clust_fcc) contact_map() (in module haddock.contact_map) ContactMap (class in haddock.contact_map)

E

em_ref() (in module haddock.em_ref)

EMRef (class in haddock.em_ref)

F

flex_ref() (in module haddock.flex_ref)

FlexRef (class in haddock.flex_ref)

H

haddock.capri_eval module haddock.clust_fcc module haddock.contact_map module haddock.em_ref module haddock.flex_ref module haddock.haddock3_extend module haddock.haddock3_run module haddock.rigid_body module haddock.sele_top module haddock.sele_top_clusts module haddock.topology module

haddock3_accessibility() (in module haddock_restraints.haddock3_accessibility) haddock3_actpass_to_ambig() (in module haddock_restraints.haddock3_actpass_to_ambig) haddock3_extend() (in module haddock.haddock3_extend) haddock3_passive_from_active() (in module haddock_restraints.haddock3_passive_from_active) haddock3_restrain_bodies() (in module haddock_restraints.haddock3_restrain_bodies) haddock3_run() (in module haddock.haddock3_run) Haddock3Accessibility (class in haddock_restraints.haddock3_accessibility) Haddock3ActpassToAmbig (class in haddock_restraints.haddock3_actpass_to_ambig) Haddock3Extend (class in haddock.haddock3_extend) Haddock3PassiveFromActive (class in haddock_restraints.haddock3_passive_from_active) Haddock3RestrainBodies (class in haddock_restraints.haddock3_restrain_bodies) Haddock3Run (class in haddock.haddock3_run) haddock_restraints.haddock3_accessibility module haddock_restraints.haddock3_actpass_to_ambig module haddock_restraints.haddock3_passive_from_active module haddock_restraints.haddock3_restrain_bodies module

L

launch() (haddock.topology.Topology method) (haddock_restraints.haddock3_accessibility.Haddock3Accessibility method) (haddock_restraints.haddock3_actpass_to_ambig.Haddock3ActpassToAmbig method) (haddock_restraints.haddock3_passive_from_active.Haddock3PassiveFromActive method) (haddock_restraints.haddock3_restrain_bodies.Haddock3RestrainBodies method)

M

module haddock.capri_eval haddock.clust_fcc haddock.contact_map haddock.em_ref haddock.flex_ref haddock.haddock3_extend haddock.haddock3_run haddock.rigid_body haddock.sele_top haddock.sele_top_clusts haddock.topology haddock_restraints.haddock3_accessibility haddock_restraints.haddock3_actpass_to_ambig haddock_restraints.haddock3_passive_from_active haddock_restraints.haddock3_restrain_bodies

R

rigid_body() (in module haddock.rigid_body)

RigidBody (class in haddock.rigid_body)

S

sele_top() (in module haddock.sele_top) sele_top_clusts() (in module haddock.sele_top_clusts)

SeleTop (class in haddock.sele_top) SeleTopClusts (class in haddock.sele_top_clusts)

T

Topology (class in haddock.topology)

topology() (in module haddock.topology)